CDS

Accession Number TCMCG051C50774
gbkey CDS
Protein Id XP_024448621.1
Location complement(join(36336..36429,38085..38208,39902..40160,40537..41301))
Gene LOC112325793
GeneID 112325793
Organism Populus trichocarpa

Protein

Length 413aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024592853.1
Definition autophagy-related protein 18c-like [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category S
Description WD repeat domain phosphoinositide-interacting protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000045        [VIEW IN EMBL-EBI]
GO:0000407        [VIEW IN EMBL-EBI]
GO:0000422        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005543        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006497        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006914        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007005        [VIEW IN EMBL-EBI]
GO:0007033        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008289        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016236        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019898        [VIEW IN EMBL-EBI]
GO:0022411        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0032266        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034045        [VIEW IN EMBL-EBI]
GO:0034497        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0035091        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042157        [VIEW IN EMBL-EBI]
GO:0042158        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044804        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0061726        [VIEW IN EMBL-EBI]
GO:0061919        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080025        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901981        [VIEW IN EMBL-EBI]
GO:1902936        [VIEW IN EMBL-EBI]
GO:1903008        [VIEW IN EMBL-EBI]
GO:1905037        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACCATGAGTTCAACTGTTTCAACTTCTCAAGGATTCCTTCCCCAGGCAAGGCATGGTTCGTTTGAATCCTCAAATGTTCTTGCTTCTGGTTCTTTAGGTCAGCCCGAGCTGGAATCCAATGGTAGCAATGAAGTGGAATTGATTTCTGCATCCTGGAACCAGGATTATGGCTGCTTTGCTGCTGGCACAAGCCATGGCTTTCGCATTTATAATTGTGAGCCTTTTAAGGAAACTTTCAGACGTGATCTCAAAAGTGGGGGATTCAAAATTGTTGAGATGCTGTTCCGGTGCAACATTCTGGCACTTGTTGGGGCTGATGCTAATTCTCAGTATCCTCCAAACAAAGTTTTGATCTGGGATGATCATCAGAGCCGGTGCATTGGTGAATTTTCATTTAGGTCTGAGGTTCGGTCTGTGAAGTTAAGGCGGGATCGCATTGTTGTTGTTCTTGAGCACAAGTTATATGTTTATAATTTCATGGATTTGAAGCTTCTTCATCAGATTGAGACTCTGGCAAATCCCAGAGGACTGTGCTGCCTTTCTCATGATTCAAATACATTTGTGTTGGCGTGCCCTGGGCTTCATCGGGGCCAGGTCCGAATTGAACACTTTGGGTTGAATGTCATGAAGTTGATTAATGCTCATGATTCTCATATTGCATGCTTGACCTTGACAATGGATGGCTTGCTTCTTGCGACTGCTAGTACAAGGGGCACTTTGATAAGAATTTTCAATACAATGGATGGCACTCGTTTACAAGAGGTGAGAAGAGGAGTTGATAGAGCAGAGATTTATGGCATTGCACTCTCTCGGAATGTCCAGTGGTTGGCTGTATCGAGTGACAAAGGTACTGTTCATATCTTCAGTCTAAGAGTTCGAGTGGCTGGAGAGGACTCATCCTCTCATCTGAGCCCTGCTCAGGGCCCGGCATTGTTAGAACAGAATTCATCATCTTCCCTTGATGGCCTTATTTCTCCAAGCACTAGTGCGAATCCTGGCTCGTCATTGTCTTTTATGAGAGGGGTTTTGCCAAAGTATTTTAGTTCTGAGTGGTCATTTGCTCAGTTCCACTTGCCTGAAGACACTCAGTACATTGCAGCTTTTGCATCTCAGAATACTGTCATTATTGTTGGCATGAATGGGAGCTTTTACAGGTGCAGCTTTGATCCGGTTCATGGAGGACAGATGTTGCAGCAGGAATATGTCCGCTTTCTACAAACTGAGAGCCGGCCTGGATAG
Protein:  
MTMSSTVSTSQGFLPQARHGSFESSNVLASGSLGQPELESNGSNEVELISASWNQDYGCFAAGTSHGFRIYNCEPFKETFRRDLKSGGFKIVEMLFRCNILALVGADANSQYPPNKVLIWDDHQSRCIGEFSFRSEVRSVKLRRDRIVVVLEHKLYVYNFMDLKLLHQIETLANPRGLCCLSHDSNTFVLACPGLHRGQVRIEHFGLNVMKLINAHDSHIACLTLTMDGLLLATASTRGTLIRIFNTMDGTRLQEVRRGVDRAEIYGIALSRNVQWLAVSSDKGTVHIFSLRVRVAGEDSSSHLSPAQGPALLEQNSSSSLDGLISPSTSANPGSSLSFMRGVLPKYFSSEWSFAQFHLPEDTQYIAAFASQNTVIIVGMNGSFYRCSFDPVHGGQMLQQEYVRFLQTESRPG